BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037F05SP1|AL430416
(877 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1495 550 e-156
>3x_Contig1495
Length = 10008
Score = 550 bits (276), Expect = e-156
Identities = 402/448 (89%)
Strand = Plus / Minus
Query: 430 gaattggaaagtttagtagaaatgaaaatgaaaaatggggaaagtgtttaagatgttgtt 489
|||||||||| |||| |||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 6298 gaattggaaactttactagaaatgaaaatgaaaaatcgccaaagtgtttaagatgttgtt 6239
Query: 490 aaaagatgaagaaataagaagagatatgaragggttaagggtagggagagttgttagggg 549
|||| ||||| ||||||||||| |||||| | ||||| |||||| |||||||||||
Sbjct: 6238 aaaacatgaacaaataagaagacatatgaaaccgttaacggtaggcagagttgttagccc 6179
Query: 550 atagtttaggttagagaggtgagtattagtgaratgtagtgatgttggtgttggataggt 609
|||||||| |||||| |||| ||||||| ||| || ||||||| || || ||||||| |
Sbjct: 6178 atagtttacgttagacaggtcagtattactgaaatctagtgatcttcgtcttggatacct 6119
Query: 610 agtttttatttgttatattgggatagtggagaatgagtagagatttggatagaatttatt 669
| ||||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct: 6118 actttttatttcttatattgggatagtggagaatgagtacagatttcgatagaatttatt 6059
Query: 670 agaaggaatggaaggtgggtggaggtttccgtvtagctgaaggaggtcttggttggaagg 729
| || ||| ||| | |||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 6058 acaaccaatccaagctcggtggacgtttccgtctagctgaaggaggtcttggttggaagg 5999
Query: 730 catacgctaaaggtgggtgagcctctactcaaaataatgaacctttgctattggctgcag 789
||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 5998 catccgctacaggtgggtcagcctctactcaaaataatgaacctttgctattggctgcag 5939
Query: 790 atgaggtttcttccsytcaatggagtagaggatgtagaggctacgaattgaaaattagta 849
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5938 atgaggtttcttccgttcaatggagtagaggatgtagaggctacgaattgaaaattagta 5879
Query: 850 ctaagaataagggmttgattcaaatgga 877
||||||||||||| ||||||||||||||
Sbjct: 5878 ctaagaataagggattgattcaaatgga 5851
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6568
Number of Sequences: 1807
Number of extensions: 6568
Number of successful extensions: 67
Number of sequences better than 1.0e-20: 1
length of query: 877
length of database: 10,358,551
effective HSP length: 16
effective length of query: 861
effective length of database: 10,329,639
effective search space: 8893819179
effective search space used: 8893819179
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)